MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1954c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1954c (requalified) — hypothetical protein Rv1954c Rv2660c (dark) — hypothetical protein Rv2660c higB (requalified) — type II toxin-antitoxin system toxin HigB higB Rv1374c (dark) — hypothetical protein Rv1374c Rv1957 (requalified) — SecB-like chaperone Rv1957 usfY (family_assigned) — hypothetical protein usfY Rv0188 (requalified) — SPW repeat protein Rv0188 Rv3661 (family_assigned) — HAD-IB family hydrolase Rv3661 Rv0061c (dark) — hypothetical protein Rv0061c Rv1954A (dark) — Hypothetical protein Rv1954A Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv2661c (dark) — hypothetical protein Rv2661c Rv2662 (dark) — hypothetical protein Rv2662 Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c Rv2658c (family_assigned) — hypothetical protein Rv2658c Rv2656c (dark) — DUF2742 domain-containing protein Rv2656c Rv2654c (requalified) — type II toxin-antitoxin system antitoxin Rv2654c higA (requalified) — type II toxin-antitoxin system antitoxin HigA higA cbs (requalified) — cystathionine beta-synthase cbs guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c Rv1375 (family_assigned) — YcaO-like family protein Rv1375 Rv1376 (family_assigned) — TfuA-like protein Rv1376 ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv1805c (dark) — hypothetical protein Rv1805c Rv2081c (dark) — hypothetical protein Rv2081c relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv3289c (dark) — hypothetical protein Rv3289c lat (requalified) — L-lysine 6-transaminase lat rsbW (requalified) — anti-sigma B factor RsbW rsbW sigF (requalified) — RNA polymerase sigma factor SigF sigF lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv3292 (family_assigned) — VOC family protein Rv3292 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c Rv0187 (requalified) — O-methyltransferase Rv0187 Rv1885c (requalified) — chorismate mutase Rv1885c Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB serC (requalified) — phosphoserine transaminase serC celA1 (requalified) — cellulase CelA celA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.