MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1938 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ephB (requalified) — epoxide hydrolase EphB ephB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv1939 (family_assigned) — flavin reductase family protein Rv1939 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv1936 (requalified) — LLM class flavin-dependent oxidoreductase Rv1936 Rv1941 (family_assigned) — SDR family oxidoreductase Rv1941 fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 Rv1833c (requalified) — haloalkane dehalogenase Rv1833c echA13 (requalified) — enoyl-CoA hydratase echA13 fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD Rv3007c (family_assigned) — flavin reductase family protein Rv3007c ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH ribC (requalified) — riboflavin synthase ribC fas (requalified) — fatty acid synthase fas fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 mce3A (family_assigned) — Mce family protein Mce3A mce3A yrbE3B (family_assigned) — ABC transporter permease yrbE3B fadB (requalified) — fatty oxidation protein FadB fadB dhaA (requalified) — haloalkane dehalogenase dhaA Rv2296 (requalified) — haloalkane dehalogenase Rv2296 adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA adh (requalified) — zinc-binding dehydrogenase adh fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks12 (requalified) — type I polyketide synthase pks12 papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.