MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1931c · 40 genes shown · anchor sigI · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv1929c (family_assigned) — TIGR03085 family metal-binding protein Rv1929c tpx (requalified) — thiol peroxidase tpx Rv1928c (family_assigned) — SDR family oxidoreductase Rv1928c bpoC (family_assigned) — alpha/beta hydrolase bpoC menC (requalified) — o-succinylbenzoate synthase menC Rv1724c (dark) — hypothetical protein Rv1724c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 cinA (requalified) — competence/damage-inducible protein A cinA Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.