MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1930c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1929c (family_assigned) — TIGR03085 family metal-binding protein Rv1929c tpx (requalified) — thiol peroxidase tpx Rv1928c (family_assigned) — SDR family oxidoreductase Rv1928c bpoC (family_assigned) — alpha/beta hydrolase bpoC menC (requalified) — o-succinylbenzoate synthase menC Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD lexA (requalified) — transcriptional repressor LexA lexA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv0517 (requalified) — acyltransferase Rv0517 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 tuf (requalified) — elongation factor Tu tuf gltB (family_assigned) — glutamate synthase large subunit gltB qcrC (requalified) — cytochrome c qcrC sodA (requalified) — superoxide dismutase sodA iscS (family_assigned) — cysteine desulfurase family protein iscS fas (requalified) — fatty acid synthase fas Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 htpG (requalified) — molecular chaperone HtpG htpG Rv0552 (requalified) — amidohydrolase Rv0552 hpx (requalified) — non-heme haloperoxidase Hpx hpx mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menE (requalified) — o-succinylbenzoate--CoA ligase menE menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c entC (requalified) — isochorismate synthase entC recA (requalified) — intein-containing recombinase RecA recA chiZ (requalified) — cell wall hydrolase ChiZ chiZ nrdR (family_assigned) — transcriptional regulator NrdR nrdR dinX (requalified) — DNA polymerase IV dinX recN (requalified) — DNA repair protein RecN recN dinP (requalified) — DNA polymerase IV dinP rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.