MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1909c · 46 genes shown · anchor katG · open gene page → · ← back to 1 hop

Evidence: Min score 0
furA (family_assigned) — Fur family transcriptional regulator furA katG (requalified) — catalase/peroxidase HPI katG Rv1907c (dark) — hypothetical protein Rv1907c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1910c (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein Rv1910c sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigA (requalified) — RNA polymerase sigma factor sigA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC sufR (family_assigned) — suf operon transcriptional regulator SufR sufR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ nat (requalified) — arylamine N-acetyltransferase nat hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC hisC2 (requalified) — histidinol-phosphate transaminase hisC2 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv0093c (family_assigned) — membrane protein Rv0093c Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 Rv2209 (requalified) — MFS transporter Rv2209 rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH ahpD (requalified) — alkyl hydroperoxide reductase ahpD trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ dsbF (requalified) — protein disulfide oxidoreductase dsbF thiX (family_assigned) — thioredoxin family protein thiX Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c rplP (requalified) — 50S ribosomal protein L16 rplP rplB (requalified) — 50S ribosomal protein L2 rplB rpsB (requalified) — 30S ribosomal protein S2 rpsB rplM (requalified) — 50S ribosomal protein L13 rplM rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsO (requalified) — 30S ribosomal protein S15 rpsO rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL sufD (requalified) — Fe-S cluster assembly protein SufD sufD Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC csd (requalified) — cysteine desulfurase csd Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.