MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1907c · 45 genes shown · anchor katG · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1907c (dark) — hypothetical protein Rv1907c katG (requalified) — catalase/peroxidase HPI katG Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c furA (family_assigned) — Fur family transcriptional regulator furA Rv0093c (family_assigned) — membrane protein Rv0093c Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 Rv2209 (requalified) — MFS transporter Rv2209 Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv1752 (family_assigned) — hypothetical protein Rv1752 nat (requalified) — arylamine N-acetyltransferase nat hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC hisC2 (requalified) — histidinol-phosphate transaminase hisC2 Rv0329c (requalified) — class I SAM-dependent methyltransferase Rv0329c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1910c (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein Rv1910c sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigC (requalified) — RNA polymerase sigma factor SigC sigC Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv2468c (requalified) — hypothetical protein Rv2468c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b acpA (requalified) — acyl carrier protein acpA fadD34 (requalified) — fatty-acid--CoA ligase FadD34 fadD34 bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 Rv2305 (family_assigned) — hypothetical protein Rv2305 iniB (requalified) — isoniazid-induced protein IniB iniB PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 espE (requalified) — type VII secretion system ESX-1 associated protein espE rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.