MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1904 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv0497 (family_assigned) — hypothetical protein Rv0497 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC mkl (family_assigned) — ABC transporter ATP-binding protein mkl mce1D (family_assigned) — virulence factor Mce family protein mce1D rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 sigF (requalified) — RNA polymerase sigma factor SigF sigF usfY (family_assigned) — hypothetical protein usfY Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c galK (requalified) — galactokinase galK Rv1751 (requalified) — oxidoreductase Rv1751 Rv2843 (family_assigned) — hypothetical protein Rv2843 moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c Rv2078 (family_assigned) — DUF2563 family protein Rv2078 lppJ (family_assigned) — hypothetical protein lppJ Rv1359 (family_assigned) — transcriptional regulator Rv1359 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv0499 (family_assigned) — thioesterase family protein Rv0499 Rv0496 (family_assigned) — hypothetical protein Rv0496 proC (requalified) — pyrroline-5-carboxylate reductase proC Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3779 (family_assigned) — DUF6541 family protein Rv3779

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.