MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1903 · 46 genes shown · anchor nanT · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1903 (family_assigned) — phage holin family protein Rv1903 nanT (family_assigned) — sialate:H+ symport family MFS transporter nanT Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 Rv0945 (requalified) — oxidoreductase Rv0945 arcA (requalified) — arginine deiminase arcA fadB5 (family_assigned) — medium chain dehydrogenase/reductase family protei fadB5 aao (requalified) — FAD-dependent oxidoreductase aao Rv1906c (family_assigned) — hypothetical protein Rv1906c Rv1910c (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein Rv1910c lppC (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein lppC Rv1907c (dark) — hypothetical protein Rv1907c Rv1191 (family_assigned) — alpha/beta hydrolase Rv1191 lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ Rv1672c (requalified) — MFS transporter Rv1672c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 nicT (family_assigned) — HoxN/HupN/NixA family nickel/cobalt transporter nicT Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg polA (requalified) — DNA polymerase I polA nei (requalified) — endonuclease VIII Nei2 nei Rv0943c (dark) — hypothetical protein Rv0943c Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 argF (requalified) — ornithine carbamoyltransferase argF argH (requalified) — argininosuccinate lyase argH argG (requalified) — argininosuccinate synthase argG Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv1000c (family_assigned) — hypothetical protein Rv1000c Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 mbtC (requalified) — polyketide synthetase MbtC mbtC pks17 (requalified) — polyketide synthase pks17 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 pks15 (requalified) — polyketide synthase pks15 pks9 (requalified) — type I polyketide synthase pks9 pks6 (requalified) — membrane bound polyketide synthase pks6 gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.