MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1898 · 46 genes shown · anchor dtd · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1898 (family_assigned) — MTH1187 family thiamine-binding protein Rv1898 dtd (requalified) — D-aminoacyl-tRNA deacylase dtd Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 Rv0552 (requalified) — amidohydrolase Rv0552 Rv0874c (family_assigned) — FIST C-terminal domain-containing protein Rv0874c Rv0842 (requalified) — MFS transporter Rv0842 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c relA (family_assigned) — RelA/SpoT family protein relA Rv3013 (family_assigned) — amino acid-binding protein Rv3013 rplD (requalified) — 50S ribosomal protein L4 rplD Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 cpsA (family_assigned) — LCP family protein cpsA ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 rpe (requalified) — ribulose-phosphate 3-epimerase rpe zapE (requalified) — cell division protein ZapE zapE aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv3035 (family_assigned) — hypothetical protein Rv3035 lmeA (requalified) — mannan chain length control protein LmeA lmeA msrB (requalified) — peptide-methionine (R)-S-oxide reductase MsrB msrB lprB (family_assigned) — DUF3558 domain-containing protein lprB menC (requalified) — o-succinylbenzoate synthase menC bpoC (family_assigned) — alpha/beta hydrolase bpoC fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0876c (requalified) — MFS transporter Rv0876c Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 Rv2209 (requalified) — MFS transporter Rv2209 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadB (requalified) — fatty oxidation protein FadB fadB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.