MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1897c · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
dtd (requalified) — D-aminoacyl-tRNA deacylase dtd Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c Rv1898 (family_assigned) — MTH1187 family thiamine-binding protein Rv1898 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c relA (family_assigned) — RelA/SpoT family protein relA Rv3013 (family_assigned) — amino acid-binding protein Rv3013 rplD (requalified) — 50S ribosomal protein L4 rplD Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 cpsA (family_assigned) — LCP family protein cpsA ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 Rv0552 (requalified) — amidohydrolase Rv0552 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 rpsF (requalified) — 30S ribosomal protein S6 rpsF rplU (requalified) — 50S ribosomal protein L21 rplU rplR (requalified) — 50S ribosomal protein L18 rplR rplB (requalified) — 50S ribosomal protein L2 rplB pykA (requalified) — pyruvate kinase pykA gmk (requalified) — guanylate kinase gmk rpsD (requalified) — 30S ribosomal protein S4 rpsD rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.