MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1883c · 46 genes shown · anchor rpfC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1883c (family_assigned) — SRPBCC family protein Rv1883c rpfC (requalified) — resuscitation-promoting factor RpfC rpfC Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c Rv1815 (family_assigned) — hypothetical protein Rv1815 lppE (requalified) — lipoprotein LpqH lppE Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 cyp140 (requalified) — cytochrome P450 cyp140 Rv1885c (requalified) — chorismate mutase Rv1885c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB Rv3776 (family_assigned) — hypothetical protein Rv3776 mce1C (family_assigned) — MCE family protein mce1C Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv1954A (dark) — Hypothetical protein Rv1954A Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv2766c (requalified) — short-chain type dehydrogenase/reductase Rv2766c Rv1816 (family_assigned) — HTH-type transcriptional regulator Rv1816 erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv3668c (requalified) — protease Rv3668c TB22.2 (family_assigned) — RsiV family protein TB22.2 pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrE (requalified) — orotate phosphoribosyltransferase pyrE Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 pks13 (requalified) — polyketide synthase Pks13 pks13 mbtE (requalified) — peptide synthetase mbtE Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv2776c (requalified) — oxidoreductase Rv2776c aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv0948c (requalified) — chorismate mutase Rv0948c fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c Rv3074 (family_assigned) — DUF222 domain-containing protein Rv3074 Rv1378c (family_assigned) — hypothetical protein Rv1378c Rv2100 (family_assigned) — hypothetical protein Rv2100 Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.