MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1877 · 46 genes shown · anchor glnA3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 bfrA (requalified) — bacterioferritin BfrA bfrA Rv1250 (requalified) — MFS transporter Rv1250 hemE (requalified) — uroporphyrinogen decarboxylase hemE mmpL2 (requalified) — RND transporter MmpL2 mmpL2 ctpE (requalified) — cation-translocating P-type ATPase ctpE dinF (family_assigned) — MATE family efflux transporter dinF Rv2923c (family_assigned) — OsmC family protein Rv2923c Rv0421c (family_assigned) — alpha/beta family hydrolase Rv0421c Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv2303c (family_assigned) — amidohydrolase family protein Rv2303c glnA2 (family_assigned) — glutamine synthetase family protein glnA2 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 Rv1260 (family_assigned) — FAD-binding protein Rv1260 gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS gltD (family_assigned) — glutamate synthase subunit beta gltD carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c mmcO (requalified) — multicopper oxidase MmcO mmcO bfrB (requalified) — ferritin BfrB bfrB hemZ (requalified) — ferrochelatase hemZ Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv3239c (requalified) — MFS transporter Rv3239c Rv3728 (requalified) — MFS transporter Rv3728 jefA (requalified) — multidrug efflux pump JefA jefA hemY (requalified) — protoporphyrinogen oxidase hemY hemC (requalified) — hydroxymethylbilane synthase hemC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG mmpS2 (family_assigned) — MmpS family protein mmpS2 Rv0508 (family_assigned) — glutaredoxin family protein Rv0508 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 hemA (requalified) — glutamyl-tRNA reductase hemA eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv0907 (family_assigned) — hypothetical protein Rv0907 Rv0906 (requalified) — MBL fold metallo-hydrolase Rv0906 echA6 (requalified) — enoyl-CoA hydratase echA6 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 atpE (family_assigned) — F0F1 ATP synthase subunit C atpE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.