MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1876 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
bfrA (requalified) — bacterioferritin BfrA bfrA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c mmcO (requalified) — multicopper oxidase MmcO mmcO bfrB (requalified) — ferritin BfrB bfrB hemZ (requalified) — ferrochelatase hemZ Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 Rv1234 (requalified) — general stress protein Rv1234 oprA (requalified) — osmosensory protein OprA oprA Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 rsfB (family_assigned) — STAS domain-containing protein rsfB Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv0849 (requalified) — MFS transporter Rv0849 cysK2 (requalified) — cysteine synthase CysK cysK2 ahpC (requalified) — peroxiredoxin AhpC ahpC lpqL (family_assigned) — M28 family metallopeptidase lpqL Rv1770 (family_assigned) — hypothetical protein Rv1770 hemY (requalified) — protoporphyrinogen oxidase hemY hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ hemE (requalified) — uroporphyrinogen decarboxylase hemE Rv0958 (family_assigned) — ATP-binding protein Rv0958 Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv1250 (requalified) — MFS transporter Rv1250 mmpL2 (requalified) — RND transporter MmpL2 mmpL2 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 Rv1260 (family_assigned) — FAD-binding protein Rv1260 gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS gltD (family_assigned) — glutamate synthase subunit beta gltD carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY sugA (family_assigned) — trehalose ABC transporter permease SugA sugA sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv1752 (family_assigned) — hypothetical protein Rv1752

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.