MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1871c · 46 genes shown · anchor lldD2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA Rv1870c (family_assigned) — hypothetical protein Rv1870c carD (requalified) — RNA polymerase-binding transcription factor CarD carD tuf (requalified) — elongation factor Tu tuf cspA (requalified) — cold shock protein CspA cspA esxN (requalified) — ESAT-6 like protein EsxN esxN rpsA (requalified) — 30S ribosomal protein S1 rpsA esxO (requalified) — type VII secretion system effector EsxO esxO Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv1919c (family_assigned) — SRPBCC family protein Rv1919c Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c pykA (requalified) — pyruvate kinase pykA mftD (requalified) — pre-mycofactocin synthase MftD mftD pca (requalified) — pyruvate carboxylase pca Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c mez (requalified) — NAD-dependent malic enzyme mez fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB rho (requalified) — transcription termination factor Rho rho coaE (requalified) — dephospho-CoA kinase coaE xthA (requalified) — exodeoxyribonuclease III protein XthA xthA yidC (requalified) — membrane protein insertase YidC yidC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rpsL (requalified) — 30S ribosomal protein S12 rpsL tsf (requalified) — translation elongation factor Ts tsf rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpmJ (requalified) — 50S ribosomal protein L36 rpmJ esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ rpmE (requalified) — 50S ribosomal protein L31 rpmE esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP esxW (requalified) — type VII secretion system protein EsxW esxW esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.