MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1861 · 46 genes shown · anchor adhA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1861 (family_assigned) — GlsB/YeaQ/YmgE family stress response membrane pro Rv1861 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c egtD (requalified) — L-histidine N(alpha)-methyltransferase egtD apa (family_assigned) — hypothetical protein apa modC (family_assigned) — sulfate/molybdate ABC transporter ATP-binding prot modC Rv1954A (dark) — Hypothetical protein Rv1954A Rv1234 (requalified) — general stress protein Rv1234 Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c bfrA (requalified) — bacterioferritin BfrA bfrA pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aldA (requalified) — aldehyde dehydrogenase aldA aofH (family_assigned) — flavin monoamine oxidase family protein aofH Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 etgB (requalified) — ergothioneine biosynthesis protein EgtB etgB egtC (requalified) — ergothioneine biosynthesis protein EgtC egtC gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE hisD (requalified) — histidinol dehydrogenase hisD modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA modB (family_assigned) — ABC transporter permease modB Rv1856c (family_assigned) — SDR family oxidoreductase Rv1856c cysC (requalified) — adenylyl-sulfate kinase cysC cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT rpfE (requalified) — resuscitation-promoting factor protein RpfE rpfE rpfC (requalified) — resuscitation-promoting factor RpfC rpfC rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD rpfA (requalified) — resuscitation-promoting factor protein RpfA rpfA higB (requalified) — type II toxin-antitoxin system toxin HigB higB lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY sugA (family_assigned) — trehalose ABC transporter permease SugA sugA sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ Rv0205 (family_assigned) — AI-2E family transporter Rv0205 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv0955 (family_assigned) — DUF6350 family protein Rv0955

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.