MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1805c · 46 genes shown · anchor PE20 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1805c (dark) — hypothetical protein Rv1805c PE20 (family_assigned) — PE family protein PE20 PE20 PPE31 (family_assigned) — PPE family protein PPE31 PPE31 Rv1804c (requalified) — DUF732 domain-containing protein Rv1804c Rv1374c (dark) — hypothetical protein Rv1374c lat (requalified) — L-lysine 6-transaminase lat cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 Rv2081c (dark) — hypothetical protein Rv2081c Rv1734c (family_assigned) — hypothetical protein Rv1734c Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv2517c (dark) — hypothetical protein Rv2517c PPE32 (family_assigned) — PPE family protein PPE32 PPE32 PPE33 (family_assigned) — PPE family protein PPE33 PPE33 PE29 (family_assigned) — PE family protein PE29 PE29 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 rplU (requalified) — 50S ribosomal protein L21 rplU PE24 (family_assigned) — PE family protein PE24 PE24 PE_PGRS40 (family_assigned) — PE-PGRS family protein PE_PGRS40 PE_PGRS40 PE_PGRS32 (family_assigned) — PE-PGRS family protein PE_PGRS32 PE_PGRS32 Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv2253 (family_assigned) — hypothetical protein Rv2253 Rv0203 (requalified) — hemophore Rv0203 pstS1 (family_assigned) — phosphate ABC transporter substrate-binding lipopr pstS1 Rv1375 (family_assigned) — YcaO-like family protein Rv1375 Rv1376 (family_assigned) — TfuA-like protein Rv1376 ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv1954c (requalified) — hypothetical protein Rv1954c Rv3289c (dark) — hypothetical protein Rv3289c usfY (family_assigned) — hypothetical protein usfY lrpA (family_assigned) — transcriptional regulator LrpA lrpA pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv3292 (family_assigned) — VOC family protein Rv3292 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2083 (dark) — hypothetical protein Rv2083 Rv2084 (dark) — hypothetical protein Rv2084 TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.