MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1804c · 36 genes shown · anchor PE_PGRS32 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1804c (requalified) — DUF732 domain-containing protein Rv1804c PE_PGRS32 (family_assigned) — PE-PGRS family protein PE_PGRS32 PE_PGRS32 Rv1805c (dark) — hypothetical protein Rv1805c Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv2253 (family_assigned) — hypothetical protein Rv2253 Rv0203 (requalified) — hemophore Rv0203 pstS1 (family_assigned) — phosphate ABC transporter substrate-binding lipopr pstS1 PE20 (family_assigned) — PE family protein PE20 PE20 PPE31 (family_assigned) — PPE family protein PPE31 PPE31 Rv1374c (dark) — hypothetical protein Rv1374c lat (requalified) — L-lysine 6-transaminase lat cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA lpqO (family_assigned) — DUF1259 domain-containing protein lpqO cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c virS (family_assigned) — AraC family transcriptional regulator virS cobB (requalified) — NAD-dependent protein deacylase cobB Rv2252 (requalified) — diacylglycerol kinase Rv2252 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 Rv2251 (requalified) — flavoprotein Rv2251 Rv2250A (family_assigned) — Possible flavoprotein Rv2250A Rv2250c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2250c Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv0201c (family_assigned) — XRE family transcriptional regulator Rv0201c mmpL11 (requalified) — RND transporter MmpL11 mmpL11 mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 Rv1157c (dark) — hypothetical protein Rv1157c mmpS4 (requalified) — siderophore RND transporter accessory protein MmpS mmpS4 pstC1 (family_assigned) — phosphate ABC transporter permease PstC pstC1 pstA2 (family_assigned) — phosphate ABC transporter permease PstA pstA2 pstB (family_assigned) — phosphate ABC transporter ATP-binding protein pstB pstC2 (family_assigned) — phosphate ABC transporter permease subunit PstC pstC2 pstA1 (family_assigned) — phosphate ABC transporter permease PstA pstA1 phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.