MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1797 · 46 genes shown · anchor mycP5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccA5 (family_assigned) — type VII secretion system ESX-5 AAA family ATPase eccA5 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv0176 (family_assigned) — RDD family protein Rv0176 mltG (requalified) — endolytic transglycosylase MltG mltG rho (requalified) — transcription termination factor Rho rho gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt Rv0175 (family_assigned) — hypothetical protein Rv0175 mce1F (family_assigned) — MCE family protein mce1F mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1C (family_assigned) — MCE family protein mce1C mce1A (family_assigned) — Mce family protein Mce1A mce1A aroE (requalified) — shikimate dehydrogenase aroE alaS (requalified) — alanine--tRNA ligase alaS ruvX (requalified) — Holliday junction resolvase RuvX ruvX Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpmE (requalified) — 50S ribosomal protein L31 rpmE gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI yidC (requalified) — membrane protein insertase YidC yidC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rplK (requalified) — 50S ribosomal protein L11 rplK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.