MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1795 · 42 genes shown · anchor eccC5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 eccA5 (family_assigned) — type VII secretion system ESX-5 AAA family ATPase eccA5 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 Rv1006 (family_assigned) — hypothetical protein Rv1006 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv0176 (family_assigned) — RDD family protein Rv0176 mltG (requalified) — endolytic transglycosylase MltG mltG eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3896c (requalified) — transglycosylase Rv3896c Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB PPE2 (family_assigned) — PPE family protein PPE2 PPE2 PPE15 (family_assigned) — PPE family protein PPE15 PPE15 PPE41 (family_assigned) — PPE family protein PPE41 PPE41 PE25 (family_assigned) — PE family protein PE25 PE25 PE8 (family_assigned) — PE family protein PE8 PE8 PPE43 (family_assigned) — PPE family protein PPE43 PPE43 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 hsr1 (requalified) — hypothetical protein hsr1 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.