MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1780 · 46 genes shown · anchor lipE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1780 (family_assigned) — hypothetical protein Rv1780 Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c Rv2342 (family_assigned) — hypothetical protein Rv2342 Rv3707c (requalified) — hypothetical protein Rv3707c lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 lipE (requalified) — lipase LipE lipE Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv0356c (family_assigned) — PaaI family thioesterase Rv0356c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 pncA (requalified) — pyrazinamidase PncA pncA Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv2876 (requalified) — transmembrane protein Rv2876 Rv3802c (requalified) — phospholipase Rv3802c aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 ask (requalified) — aspartate kinase ask asd (requalified) — aspartate-semialdehyde dehydrogenase asd lpqF (requalified) — serine hydrolase lpqF Rv2743c (family_assigned) — hypothetical protein Rv2743c thiX (family_assigned) — thioredoxin family protein thiX hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3035 (family_assigned) — hypothetical protein Rv3035 echA21 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA21 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv3480c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3480c ephC (requalified) — epoxide hydrolase EphC ephC pks13 (requalified) — polyketide synthase Pks13 pks13 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.