MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1762c · 46 genes shown · anchor gltB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1762c (family_assigned) — heavy metal-binding domain-containing protein Rv1762c Rv1761c (family_assigned) — DUF5073 family protein Rv1761c Rv1775 (family_assigned) — hypothetical protein Rv1775 gltB (family_assigned) — glutamate synthase large subunit gltB Rv2113 (family_assigned) — integral membrane protein Rv2113 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT ptrp (family_assigned) — hypothetical protein ptrp Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv2729c (family_assigned) — DMT family transporter Rv2729c Rv0143c (requalified) — chloride channel protein Rv0143c rpsT (requalified) — 30S ribosomal protein S20 rpsT hupB (family_assigned) — DNA-binding protein HupB hupB nicT (family_assigned) — HoxN/HupN/NixA family nickel/cobalt transporter nicT Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c Rv2212 (requalified) — adenylyl cyclase Rv2212 Rv1585c (family_assigned) — hypothetical protein Rv1585c Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv2114 (dark) — hypothetical protein Rv2114 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R ift (requalified) — necrotizing toxin immunity factor IFT ift esxE (requalified) — ESAT-6 like protein EsxE esxE eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxF (requalified) — pore-forming CpnT exporter EsxF esxF Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 Rv2577 (family_assigned) — metallophosphoesterase family protein Rv2577 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv2963 (requalified) — permease Rv2963 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv0089 (requalified) — methyltransferase Rv0089 Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.