MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1739c · 46 genes shown · anchor vapC34 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1739c (family_assigned) — SulP family inorganic anion transporter Rv1739c pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks17 (requalified) — polyketide synthase pks17 qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv1277 (family_assigned) — hypothetical protein Rv1277 nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM Rv1742 (family_assigned) — hypothetical protein Rv1742 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB pks8 (requalified) — polyketide synthase pks8 pks9 (requalified) — type I polyketide synthase pks9 pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrA (requalified) — hypothetical protein qcrA ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 ptpA (requalified) — protein-tyrosine-phosphatase ptpA nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA Rv1278 (family_assigned) — AAA family ATPase Rv1278 polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dinG (requalified) — ATP-dependent helicase DinG dinG Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279 recA (requalified) — intein-containing recombinase RecA recA nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.