MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1728c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1728c (requalified) — glycoside hydrolase Rv1728c Rv1729c (requalified) — class I SAM-dependent methyltransferase Rv1729c Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c ptrp (family_assigned) — hypothetical protein ptrp Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c Rv1730c (family_assigned) — serine hydrolase domain-containing protein Rv1730c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv3909 (dark) — hypothetical protein Rv3909 Rv0227c (family_assigned) — membrane protein Rv0227c Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c pptT (requalified) — 4'-phosphopantetheinyl transferase pptT eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 Rv3177 (family_assigned) — alpha/beta hydrolase Rv3177 rplB (requalified) — 50S ribosomal protein L2 rplB Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3657c (family_assigned) — membrane protein Rv3657c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv3655c (requalified) — apoptosis inhibitor Rv3655c ssd (requalified) — septum site-determining protein Ssd ssd Rv3656c (dark) — DUF4244 domain-containing protein Rv3656c Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1775 (family_assigned) — hypothetical protein Rv1775 mapB (requalified) — methionine aminopeptidase mapB Rv0320 (family_assigned) — hypothetical protein Rv0320 Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 vapC23 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC23 lipD (requalified) — lipase LipD lipD Rv2000 (family_assigned) — FAD/NAD(P)-binding protein Rv2000 Rv1723 (requalified) — serine hydrolase Rv1723 Rv1367c (family_assigned) — hypothetical protein Rv1367c pirG (requalified) — exported repetitive protein pirG Rv0312 (family_assigned) — Hsp70 family protein Rv0312 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv1157c (dark) — hypothetical protein Rv1157c ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.