MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1727 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1727 (family_assigned) — TIGR03086 family metal-binding protein Rv1727 Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 Rv0801 (family_assigned) — VOC family protein Rv0801 Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1724c (dark) — hypothetical protein Rv1724c Rv1749c (family_assigned) — DUF6790 family protein Rv1749c Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 Rv1775 (family_assigned) — hypothetical protein Rv1775 rskA (requalified) — anti-sigma-K factor RskA rskA rslA (requalified) — anti-sigma-L factor RslA rslA Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3177 (family_assigned) — alpha/beta hydrolase Rv3177 cut1 (requalified) — cutinase cut1 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 pepC (family_assigned) — M18 family aminopeptidase pepC Rv0799c (requalified) — Dyp-type peroxidase Rv0799c cfp29 (requalified) — family 1 encapsulin nanocompartment shell protein cfp29 purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv0079 (requalified) — dormancy-associated translation inhibitor Rv0079 Rv3134c (requalified) — universal stress protein Rv3134c Rv1996 (requalified) — universal stress protein Rv1996 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 TB31.7 (requalified) — universal stress protein TB31.7 TB31.7 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv1682 (family_assigned) — hypothetical protein Rv1682 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c ptrp (family_assigned) — hypothetical protein ptrp rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.