MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1721c · 46 genes shown · anchor vapC12 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB12 (requalified) — antitoxin vapB12 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 Rv1722 (requalified) — biotin carboxylase Rv1722 Rv1723 (requalified) — serine hydrolase Rv1723 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 Rv1585c (family_assigned) — hypothetical protein Rv1585c vapB7 (requalified) — antitoxin vapB7 PPE30 (family_assigned) — PPE family protein PPE30 PPE30 Rv1584c (family_assigned) — hypothetical protein Rv1584c Rv0370c (family_assigned) — MoxR family ATPase Rv0370c Rv2250A (family_assigned) — Possible flavoprotein Rv2250A vapB41 (requalified) — antitoxin VapB41 vapB41 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 mazE9 (requalified) — antitoxin MazE9 mazE9 accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv2531c (requalified) — amino acid decarboxylase Rv2531c fas (requalified) — fatty acid synthase fas Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1730c (family_assigned) — serine hydrolase domain-containing protein Rv1730c vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip Rv1586c (family_assigned) — recombinase family protein Rv1586c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv1588c (family_assigned) — hypothetical protein Rv1588c Rv1582c (family_assigned) — phage/plasmid primase%2C P4 family Rv1582c Rv1583c (dark) — DUF2742 domain-containing protein Rv1583c vapC7 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC7 mazE2 (family_assigned) — ribbon-helix-helix protein%2C CopG family mazE2 atsD (requalified) — arylsulfatase AtsD atsD mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 vapB8 (requalified) — antitoxin VapB8 vapB8 vapC8 (family_assigned) — PIN domain-containing protein vapC8 PPE29 (family_assigned) — PPE family protein PPE29 PPE29 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.