MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1711 · 46 genes shown · anchor cmk · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1711 (requalified) — pseudouridine synthase Rv1711 cmk (requalified) — (d)CMP kinase cmk engA (requalified) — ribosome biogenesis GTPase Der engA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1703c (requalified) — O-methyltransferase Rv1703c fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 era (requalified) — GTPase Era era Rv1716 (family_assigned) — hypothetical protein Rv1716 rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA dnaG (requalified) — DNA primase dnaG smc (requalified) — chromosome segregation protein SMC smc parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mutY (requalified) — A/G-specific adenine glycosylase mutY lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN end (requalified) — deoxyribonuclease IV end mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3728 (requalified) — MFS transporter Rv3728 Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 aofH (family_assigned) — flavin monoamine oxidase family protein aofH adhB (requalified) — alcohol dehydrogenase B adhB adh (requalified) — zinc-binding dehydrogenase adh adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2367c (requalified) — endoribonuclease Rv2367c Rv2366c (family_assigned) — hemolysin family protein Rv2366c rpsF (requalified) — 30S ribosomal protein S6 rpsF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.