MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1706A · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1706A (dark) — hypothetical protein Rv1706A Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB Rv1708 (requalified) — initiation inhibitor protein Rv1708 engA (requalified) — ribosome biogenesis GTPase Der engA cmk (requalified) — (d)CMP kinase cmk scpA (requalified) — segregation/condensation protein A scpA Rv1711 (requalified) — pseudouridine synthase Rv1711 PPE23 (family_assigned) — PPE family protein PPE23 PPE23 Rv3047c (dark) — hypothetical protein Rv3047c Rv0190 (family_assigned) — metal-sensitive transcriptional regulator Rv0190 Rv2325c (family_assigned) — CbiQ family ECF transporter T component Rv2325c Rv1382 (requalified) — transporter Rv1382 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB smc (requalified) — chromosome segregation protein SMC smc parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB dnaG (requalified) — DNA primase dnaG rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA xthA (requalified) — exodeoxyribonuclease III protein XthA xthA PPE22 (family_assigned) — PPE family protein PPE22 PPE22 cycA (requalified) — amino acid permease cycA Rv1703c (requalified) — O-methyltransferase Rv1703c Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv3046c (family_assigned) — DUF3349 domain-containing protein Rv3046c recX (requalified) — recombination regulator RecX recX Rv2898c (family_assigned) — YraN family protein Rv2898c ilvD (requalified) — dihydroxy-acid dehydratase ilvD Rv0191 (family_assigned) — Rv0191 family MFS efflux transporter Rv0191 mscR (requalified) — S-(hydroxymethyl)mycothiol dehydrogenase mscR adhD (requalified) — NDMA-dependent alcohol dehydrogenase adhD adhB (requalified) — alcohol dehydrogenase B adhB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv2326c (family_assigned) — ABC transporter ATP-binding protein Rv2326c Rv2327 (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2327 dppD (family_assigned) — ABC transporter ATP-binding protein dppD Rv3256c (requalified) — TobH protein Rv3256c Rv1634 (requalified) — MFS transporter Rv1634 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.