MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1700 · 46 genes shown · anchor pyrG · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 pyrG (requalified) — CTP synthase pyrG xerD (requalified) — site-specific tyrosine recombinase XerD xerD Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD mctB (requalified) — copper transporter MctB mctB steA (family_assigned) — putative cytokinetic ring protein SteA steA fas (requalified) — fatty acid synthase fas tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA rphA (requalified) — ribonuclease PH rphA ppnK (requalified) — NAD kinase ppnK Rv1691 (family_assigned) — hypothetical protein Rv1691 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA ndkA (requalified) — nucleoside-diphosphate kinase ndkA dcd (requalified) — dCTP deaminase dcd rplF (requalified) — 50S ribosomal protein L6 rplF Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c gadB (requalified) — glutamate decarboxylase gadB gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1254 (requalified) — acyltransferase Rv1254 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 recN (requalified) — DNA repair protein RecN recN lcp1 (requalified) — phosphotransferase Lcp1 lcp1 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 Rv1693 (dark) — hypothetical protein Rv1693 Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv2681 (requalified) — ribonuclease D Rv2681 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1339 (family_assigned) — hypothetical protein Rv1339 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD nadE (requalified) — NAD(+) synthase nadE nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.