MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1694 · 39 genes shown · anchor ppnK · open gene page → · ← back to 1 hop

Evidence: Min score 0
tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA ppnK (requalified) — NAD kinase ppnK recN (requalified) — DNA repair protein RecN recN Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv1693 (dark) — hypothetical protein Rv1693 Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 steA (family_assigned) — putative cytokinetic ring protein SteA steA mctB (requalified) — copper transporter MctB mctB lprJ (requalified) — lipoprotein LprJ lprJ Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC xerD (requalified) — site-specific tyrosine recombinase XerD xerD pyrG (requalified) — CTP synthase pyrG nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD nadE (requalified) — NAD(+) synthase nadE nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR cobB (requalified) — NAD-dependent protein deacylase cobB pntB (family_assigned) — NAD(P)(+) transhydrogenase (Re/Si-specific) subuni pntB htpG (requalified) — molecular chaperone HtpG htpG alaS (requalified) — alanine--tRNA ligase alaS glpK (requalified) — glycerol kinase GlpK glpK plsB1 (requalified) — lysophospholipid acyltransferase plsB1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 adhC (requalified) — NAD(P)-dependent alcohol dehydrogenase adhC lcp1 (requalified) — phosphotransferase Lcp1 lcp1 spmT (requalified) — sphingomyelinase spmT Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 sigA (requalified) — RNA polymerase sigma factor sigA sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA ndkA (requalified) — nucleoside-diphosphate kinase ndkA dcd (requalified) — dCTP deaminase dcd rplF (requalified) — 50S ribosomal protein L6 rplF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.