MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1687c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1687c (family_assigned) — ABC transporter ATP-binding protein Rv1687c Rv1686c (family_assigned) — ABC transporter permease Rv1686c Rv1685c (family_assigned) — TetR family transcriptional regulator Rv1685c mpg (requalified) — DNA-3-methyladenine glycosylase mpg irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c tyrS (requalified) — tyrosine--tRNA ligase tyrS irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 drrC (family_assigned) — ABC transporter permease drrC Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c pth (requalified) — aminoacyl-tRNA hydrolase pth tuf (requalified) — elongation factor Tu tuf xthA (requalified) — exodeoxyribonuclease III protein XthA xthA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT mbtE (requalified) — peptide synthetase mbtE mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA dnaK (requalified) — molecular chaperone DnaK dnaK Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c lprB (family_assigned) — DUF3558 domain-containing protein lprB lprC (family_assigned) — DUF3558 domain-containing protein lprC eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 Rv0435c (family_assigned) — AAA family ATPase Rv0435c tsf (requalified) — translation elongation factor Ts tsf fas (requalified) — fatty acid synthase fas argS (requalified) — arginine--tRNA ligase argS prfA (requalified) — peptide chain release factor 1 prfA mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtI (requalified) — salicylate synthase mbtI Rv0193c (family_assigned) — hypothetical protein Rv0193c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0195 (requalified) — response regulator transcription factor Rv0195 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr virS (family_assigned) — AraC family transcriptional regulator virS Rv0603 (family_assigned) — hypothetical protein Rv0603 drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.