MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1685c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1685c (family_assigned) — TetR family transcriptional regulator Rv1685c Rv1686c (family_assigned) — ABC transporter permease Rv1686c Rv1687c (family_assigned) — ABC transporter ATP-binding protein Rv1687c mpg (requalified) — DNA-3-methyladenine glycosylase mpg tyrS (requalified) — tyrosine--tRNA ligase tyrS pth (requalified) — aminoacyl-tRNA hydrolase pth tuf (requalified) — elongation factor Tu tuf Rv1545 (dark) — hypothetical protein Rv1545 mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 pcnA (requalified) — poly(A) polymerase PcnA pcnA Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT tsf (requalified) — translation elongation factor Ts tsf fas (requalified) — fatty acid synthase fas argS (requalified) — arginine--tRNA ligase argS prfA (requalified) — peptide chain release factor 1 prfA rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsJ (requalified) — 30S ribosomal protein S10 rpsJ Rv1544 (family_assigned) — SDR family oxidoreductase Rv1544 Rv1543 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1543 Rv1546 (family_assigned) — SRPBCC family protein Rv1546 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 glbN (requalified) — group 1 truncated hemoglobin GlbN glbN darT (requalified) — toxin-antitoxin system toxin DarT darT mazE6 (requalified) — antitoxin MazE6 mazE6 mazE9 (requalified) — antitoxin MazE9 mazE9 mazE7 (requalified) — antitoxin MazE7 mazE7 ctpG (requalified) — cation transporter ATPase CptG ctpG Rv1993c (family_assigned) — DUF1490 family protein Rv1993c regX3 (requalified) — two component sensory transduction protein RegX regX3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.