MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1684 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1684 (family_assigned) — Trm112 family protein Rv1684 Rv1683 (requalified) — acyl-CoA synthetase Rv1683 Rv0759c (family_assigned) — hypothetical protein Rv0759c aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv2001 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv2001 Rv3802c (requalified) — phospholipase Rv3802c Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 Rv2342 (family_assigned) — hypothetical protein Rv2342 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c embB (requalified) — arabinosyltransferase EmbB embB ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rhlE (requalified) — DEAD/DEAH box helicase rhlE aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 embA (requalified) — arabinosyltransferase EmbA embA ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv2000 (family_assigned) — FAD/NAD(P)-binding protein Rv2000 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c fbpD (requalified) — MPT51/MPB51 antigen fbpD pks13 (requalified) — polyketide synthase Pks13 pks13 fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv3035 (family_assigned) — hypothetical protein Rv3035 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv1780 (family_assigned) — hypothetical protein Rv1780 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rplO (requalified) — 50S ribosomal protein L15 rplO ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.