MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1683 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1683 (requalified) — acyl-CoA synthetase Rv1683 Rv1684 (family_assigned) — Trm112 family protein Rv1684 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 rplF (requalified) — 50S ribosomal protein L6 rplF Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c pks13 (requalified) — polyketide synthase Pks13 pks13 Rv2876 (requalified) — transmembrane protein Rv2876 Rv0759c (family_assigned) — hypothetical protein Rv0759c aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv2001 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv2001 Rv3802c (requalified) — phospholipase Rv3802c Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 fas (requalified) — fatty acid synthase fas ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB ephC (requalified) — epoxide hydrolase EphC ephC ramB (family_assigned) — acetate metabolism transcriptional regulator RamB ramB Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c Rv0885 (requalified) — diiron oxygenase Rv0885 Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 glf (requalified) — UDP-galactopyranose mutase glf lprE (family_assigned) — LppP/LprE family lipoprotein lprE mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp fadD32 (requalified) — long-chain-fatty-acid--AMP ligase FadD32 fadD32 accD4 (family_assigned) — acyl-CoA carboxylase subunit beta accD4 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.