MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1680 · 46 genes shown · anchor fadE16 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 moeX (requalified) — radical SAM protein moeX Rv1678 (family_assigned) — hypothetical protein Rv1678 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv1676 (family_assigned) — peroxiredoxin-like family protein Rv1676 Rv1682 (family_assigned) — hypothetical protein Rv1682 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr dsbF (requalified) — protein disulfide oxidoreductase dsbF hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF Rv0911 (family_assigned) — VOC family protein Rv0911 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadB (requalified) — fatty oxidation protein FadB fadB moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2209 (requalified) — MFS transporter Rv2209 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1359 (family_assigned) — transcriptional regulator Rv1359 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c ahpC (requalified) — peroxiredoxin AhpC ahpC msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.