MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1679 · 46 genes shown · anchor moeX · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 moeX (requalified) — radical SAM protein moeX Rv1678 (family_assigned) — hypothetical protein Rv1678 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadB (requalified) — fatty oxidation protein FadB fadB fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv1676 (family_assigned) — peroxiredoxin-like family protein Rv1676 dsbF (requalified) — protein disulfide oxidoreductase dsbF Rv1682 (family_assigned) — hypothetical protein Rv1682 fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 echA13 (requalified) — enoyl-CoA hydratase echA13 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 pflA (requalified) — AmmeMemoRadiSam system radical SAM enzyme pflA fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.