MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1638 · 46 genes shown · anchor uvrB · open gene page → · ← back to 1 hop

Evidence: Min score 0
uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB mfd (requalified) — transcription-repair coupling factor mfd uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1637c (family_assigned) — hypothetical protein Rv1637c Rv2191 (family_assigned) — hypothetical protein Rv2191 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 recA (requalified) — intein-containing recombinase RecA recA uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 gltB (family_assigned) — glutamate synthase large subunit gltB ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB rho (requalified) — transcription termination factor Rho rho Rv1634 (requalified) — MFS transporter Rv1634 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rapZ (requalified) — RNase adapter RapZ rapZ cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA whiA (family_assigned) — DNA-binding protein WhiA whiA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv1457c (family_assigned) — ABC transporter permease Rv1457c truA (requalified) — tRNA pseudouridine synthase A truA Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c adnB (requalified) — ATP-dependent DNA helicase AdnB adnB adnA (requalified) — ATP-dependent DNA helicase AdnA adnA mku (requalified) — Ku protein mku Rv0948c (requalified) — chorismate mutase Rv0948c recX (requalified) — recombination regulator RecX recX polA (requalified) — DNA polymerase I polA lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaK (requalified) — molecular chaperone DnaK dnaK Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c htpG (requalified) — molecular chaperone HtpG htpG Rv2264c (family_assigned) — Hsp70 family protein Rv2264c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.