MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1629 · 46 genes shown · anchor coaE · open gene page → · ← back to 1 hop

Evidence: Min score 0
polA (requalified) — DNA polymerase I polA dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 dinG (requalified) — ATP-dependent helicase DinG dinG helZ (requalified) — DEAD/DEAH box helicase helZ lprE (family_assigned) — LppP/LprE family lipoprotein lprE coaE (requalified) — dephospho-CoA kinase coaE ligD (requalified) — ATP-dependent DNA ligase ligD rpsA (requalified) — 30S ribosomal protein S1 rpsA dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB recX (requalified) — recombination regulator RecX recX lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279 topA (requalified) — type I DNA topoisomerase topA rplA (requalified) — 50S ribosomal protein L1 rplA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB mec (requalified) — CysO-cysteine peptidase mec Rv2102 (family_assigned) — hypothetical protein Rv2102 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv2133c (family_assigned) — SCO1664 family protein Rv2133c dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c deaD (requalified) — DEAD/DEAH box helicase deaD Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB acpS (requalified) — holo-ACP synthase acpS Rv1870c (family_assigned) — hypothetical protein Rv1870c rnhB (requalified) — ribonuclease HII rnhB Rv0939 (family_assigned) — fumarylacetoacetate hydrolase family protein Rv0939 mku (requalified) — Ku protein mku rpsH (requalified) — 30S ribosomal protein S8 rpsH rplD (requalified) — 50S ribosomal protein L4 rplD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.