MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1626 · 46 genes shown · anchor pdtaS · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1626 (family_assigned) — ANTAR domain-containing response regulator Rv1626 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv3220c (family_assigned) — histidine kinase N-terminal domain-containing prot Rv3220c Rv2239c (family_assigned) — hypothetical protein Rv2239c atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c gltB (family_assigned) — glutamate synthase large subunit gltB regX3 (requalified) — two component sensory transduction protein RegX regX3 cya (requalified) — adenylate cyclase cya amt (requalified) — ammonium transporter amt Rv0831c (family_assigned) — TIGR04255 family protein Rv0831c trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC rpsH (requalified) — 30S ribosomal protein S8 rpsH rplD (requalified) — 50S ribosomal protein L4 rplD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsD (requalified) — 30S ribosomal protein S4 rpsD TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 ahpE (requalified) — peroxiredoxin AhpE ahpE Rv2240c (family_assigned) — hypothetical protein Rv2240c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c frr (requalified) — ribosome recycling factor frr atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpE (family_assigned) — F0F1 ATP synthase subunit C atpE ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.