MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1622c · 46 genes shown · anchor cydA · open gene page → · ← back to 1 hop

Evidence: Min score 0
cydB (family_assigned) — cytochrome d ubiquinol oxidase subunit II cydB cydA (family_assigned) — cytochrome D ubiquinol oxidase subunit I CydA cydA cydD (family_assigned) — cytochrome biosyntheisis ABC transporter ATP-bindi cydD cydC (family_assigned) — thiol reductant ABC exporter subunit CydC cydC Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c menH (requalified) — demethylmenaquinone methyltransferase menH cya (requalified) — adenylate cyclase cya ndh (requalified) — NAD(P)/FAD-dependent oxidoreductase ndh ndhA (requalified) — NAD(P)/FAD-dependent oxidoreductase ndhA atpB (family_assigned) — F0F1 ATP synthase subunit A atpB Rv1456c (requalified) — heme A synthase Rv1456c fprB (requalified) — FAD-dependent oxidoreductase fprB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH panD (requalified) — aspartate 1-decarboxylase panD Rv2952 (requalified) — phthiotriol/phenolphthiotriol dimycocerosates meth Rv2952 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c mgtC (family_assigned) — MgtC/SapB family protein mgtC menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 menC (requalified) — o-succinylbenzoate synthase menC bpoC (family_assigned) — alpha/beta hydrolase bpoC relA (family_assigned) — RelA/SpoT family protein relA pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 Rv1855c (requalified) — LLM class F420-dependent oxidoreductase Rv1855c Rv1856c (family_assigned) — SDR family oxidoreductase Rv1856c ppa (requalified) — inorganic diphosphatase ppa gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv0393 (family_assigned) — hypothetical protein Rv0393 atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG ctaB (requalified) — heme o synthase ctaB Rv1457c (family_assigned) — ABC transporter permease Rv1457c Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c Rv2235 (family_assigned) — SURF1 family protein Rv2235

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.