MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1620c · 46 genes shown · anchor cydD · open gene page → · ← back to 1 hop

Evidence: Min score 0
cydC (family_assigned) — thiol reductant ABC exporter subunit CydC cydC cydD (family_assigned) — cytochrome biosyntheisis ABC transporter ATP-bindi cydD cydB (family_assigned) — cytochrome d ubiquinol oxidase subunit II cydB cydA (family_assigned) — cytochrome D ubiquinol oxidase subunit I CydA cydA Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c modC (family_assigned) — sulfate/molybdate ABC transporter ATP-binding prot modC Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c aftD (family_assigned) — DUF3367 domain-containing protein aftD cya (requalified) — adenylate cyclase cya narI (family_assigned) — respiratory nitrate reductase subunit gamma narI narG (family_assigned) — nitrate reductase subunit alpha narG Rv2952 (requalified) — phthiotriol/phenolphthiotriol dimycocerosates meth Rv2952 menH (requalified) — demethylmenaquinone methyltransferase menH panD (requalified) — aspartate 1-decarboxylase panD mgtC (family_assigned) — MgtC/SapB family protein mgtC Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH pimE (requalified) — mannosyltransferase pimE Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 modB (family_assigned) — ABC transporter permease modB cysC (requalified) — adenylyl-sulfate kinase cysC modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT apa (family_assigned) — hypothetical protein apa Rv0205 (family_assigned) — AI-2E family transporter Rv0205 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA Rv0227c (family_assigned) — membrane protein Rv0227c relA (family_assigned) — RelA/SpoT family protein relA pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 narH (family_assigned) — nitrate reductase subunit beta narH narJ (family_assigned) — nitrate reductase subunit delta narJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.