MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1590 · 46 genes shown · anchor bioB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1590 (family_assigned) — hypothetical protein Rv1590 bioB (requalified) — biotin synthase BioB bioB Rv1591 (dark) — DUF2567 domain-containing protein Rv1591 lprD (family_assigned) — hypothetical protein lprD Rv2001 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv2001 octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC bioD (requalified) — dethiobiotin synthase bioD Rv1683 (requalified) — acyl-CoA synthetase Rv1683 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 Rv1342c (family_assigned) — hypothetical protein Rv1342c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0049 (dark) — hypothetical protein Rv0049 Rv0358 (requalified) — peptidase M50 Rv0358 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 Rv2000 (family_assigned) — FAD/NAD(P)-binding protein Rv2000 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv1684 (family_assigned) — Trm112 family protein Rv1684 gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP rsfS (requalified) — ribosome silencing factor rsfS nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD Rv2417c (family_assigned) — DegV family protein Rv2417c Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 pimA (requalified) — phosphatidyl-myo-inositol alpha-mannosyltransferas pimA Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2611c (requalified) — phosphatidylinositol mannoside acyltransferase Rv2611c Rv2613c (requalified) — ATP adenylyltransferase Rv2613c thrS (requalified) — threonine--tRNA ligase thrS pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 embA (requalified) — arabinosyltransferase EmbA embA embB (requalified) — arabinosyltransferase EmbB embB ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv1571 (family_assigned) — 2'-5' RNA ligase family protein Rv1571 bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.