MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1585c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1585c (family_assigned) — hypothetical protein Rv1585c Rv1586c (family_assigned) — recombinase family protein Rv1586c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv1588c (family_assigned) — hypothetical protein Rv1588c Rv1582c (family_assigned) — phage/plasmid primase%2C P4 family Rv1582c Rv1584c (family_assigned) — hypothetical protein Rv1584c Rv1583c (dark) — DUF2742 domain-containing protein Rv1583c Rv1573 (dark) — hypothetical protein Rv1573 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 PPE29 (family_assigned) — PPE family protein PPE29 PPE29 vapB12 (requalified) — antitoxin vapB12 Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 PPE30 (family_assigned) — PPE family protein PPE30 PPE30 Rv3467 (family_assigned) — hypothetical protein Rv3467 Rv0393 (family_assigned) — hypothetical protein Rv0393 Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv3466 (family_assigned) — hypothetical protein Rv3466 Rv1572c (dark) — Conserved hypothetical protein Rv1572c Rv1574 (requalified) — phage protein Rv1574 Rv1575 (requalified) — phage protein Rv1575 mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE Rv2645 (family_assigned) — hypothetical protein Rv2645 ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv3479 (requalified) — transmembrane protein Rv3479 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 PE22 (family_assigned) — PE family protein PE22 PE22 PE_PGRS18 (family_assigned) — PE-PGRS family protein PE_PGRS18 PE_PGRS18 PE_PGRS46 (family_assigned) — PE-PGRS family protein PE_PGRS46 PE_PGRS46 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 Rv1722 (requalified) — biotin carboxylase Rv1722 Rv1723 (requalified) — serine hydrolase Rv1723 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB7 (requalified) — antitoxin vapB7 cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 Rv3428c (requalified) — transposase Rv3428c Rv2424c (requalified) — transposase Rv2424c Rv2177c (requalified) — transposase Rv2177c istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB Rv2944 (requalified) — insertion sequence element IS1533 transposase Rv2944 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.