MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1575 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1575 (requalified) — phage protein Rv1575 Rv1574 (requalified) — phage protein Rv1574 Rv1573 (dark) — hypothetical protein Rv1573 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 dusB (requalified) — tRNA dihydrouridine synthase DusB dusB ltp1 (requalified) — lipid-transfer protein ltp1 Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 aofH (family_assigned) — flavin monoamine oxidase family protein aofH sppA (requalified) — protease IV SppA sppA cut1 (requalified) — cutinase cut1 Rv0176 (family_assigned) — RDD family protein Rv0176 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 Rv1132 (family_assigned) — DUF3556 domain-containing protein Rv1132 Rv1572c (dark) — Conserved hypothetical protein Rv1572c mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE Rv2645 (family_assigned) — hypothetical protein Rv2645 ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 desA1 (requalified) — acyl-ACP desaturase DesA desA1 Rv3282 (requalified) — nucleoside triphosphate pyrophosphatase Rv3282 desA2 (requalified) — acyl-ACP desaturase desA2 fdxC (family_assigned) — ferredoxin family protein fdxC Rv0825c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0825c gltS (requalified) — glutamate--tRNA ligase gltS fadB (requalified) — fatty oxidation protein FadB fadB fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv0459 (family_assigned) — DUF779 domain-containing protein Rv0459 acs (requalified) — acetate--CoA ligase acs ackA (requalified) — acetate kinase ackA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB adh (requalified) — zinc-binding dehydrogenase adh Rv1703c (requalified) — O-methyltransferase Rv1703c helZ (requalified) — DEAD/DEAH box helicase helZ pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.