MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1571 · 45 genes shown · anchor bioD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1571 (family_assigned) — 2'-5' RNA ligase family protein Rv1571 bioD (requalified) — dethiobiotin synthase bioD bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA Rv1567c (family_assigned) — membrane protein Rv1567c treY (requalified) — maltooligosyl trehalose synthase treY Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c Rv0519c (family_assigned) — membrane protein Rv0519c Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv1140 (family_assigned) — integral membrane protein Rv1140 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 bioB (requalified) — biotin synthase BioB bioB bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treX (requalified) — maltooligosyl trehalose synthase treX treS (requalified) — maltose alpha-D-glucosyltransferase treS malQ (requalified) — 4-alpha-glucanotransferase malQ Rv1565c (family_assigned) — acyltransferase family protein Rv1565c glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE atsB (requalified) — arylsulfatase AtsB atsB phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 rsfS (requalified) — ribosome silencing factor rsfS rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 pks13 (requalified) — polyketide synthase Pks13 pks13 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1359 (family_assigned) — transcriptional regulator Rv1359 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mftR (family_assigned) — mycofactocin system transcriptional regulator mftR mce3F (family_assigned) — MlaD family protein mce3F mce3C (family_assigned) — virulence factor Mce family protein mce3C Rv1973 (family_assigned) — hypothetical protein Rv1973 lprM (family_assigned) — Mce family lipoprotein LprM lprM mce3A (family_assigned) — Mce family protein Mce3A mce3A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.