MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1570 · 46 genes shown · anchor bioA · open gene page → · ← back to 1 hop

Evidence: Min score 0
bioD (requalified) — dethiobiotin synthase bioD bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA bioB (requalified) — biotin synthase BioB bioB bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 Rv1571 (family_assigned) — 2'-5' RNA ligase family protein Rv1571 bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS Rv1567c (family_assigned) — membrane protein Rv1567c Rv3329 (requalified) — aminotransferase Rv3329 treY (requalified) — maltooligosyl trehalose synthase treY fas (requalified) — fatty acid synthase fas Rv1590 (family_assigned) — hypothetical protein Rv1590 cysC (requalified) — adenylyl-sulfate kinase cysC birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv1591 (dark) — DUF2567 domain-containing protein Rv1591 Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c acpA (requalified) — acyl carrier protein acpA Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 fadD34 (requalified) — fatty-acid--CoA ligase FadD34 fadD34 cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobO (requalified) — cob(I)alamin adenosyltransferase cobO Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treX (requalified) — maltooligosyl trehalose synthase treX treS (requalified) — maltose alpha-D-glucosyltransferase treS malQ (requalified) — 4-alpha-glucanotransferase malQ Rv1565c (family_assigned) — acyltransferase family protein Rv1565c glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 lprD (family_assigned) — hypothetical protein lprD Rv2001 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv2001 octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.