MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1569 · 46 genes shown · anchor bioA · open gene page → · ← back to 1 hop

Evidence: Min score 0
bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA bioD (requalified) — dethiobiotin synthase bioD bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 bioB (requalified) — biotin synthase BioB bioB Rv1571 (family_assigned) — 2'-5' RNA ligase family protein Rv1571 Rv1567c (family_assigned) — membrane protein Rv1567c treY (requalified) — maltooligosyl trehalose synthase treY gcvT (requalified) — aminomethyltransferase gcvT Rv3329 (requalified) — aminotransferase Rv3329 Rv3726 (requalified) — zinc-binding dehydrogenase Rv3726 Rv1895 (requalified) — zinc-binding alcohol dehydrogenase Rv1895 adh (requalified) — zinc-binding dehydrogenase adh cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS acpA (requalified) — acyl carrier protein acpA Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 fadD34 (requalified) — fatty-acid--CoA ligase FadD34 fadD34 Rv1590 (family_assigned) — hypothetical protein Rv1590 birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv1591 (dark) — DUF2567 domain-containing protein Rv1591 Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treX (requalified) — maltooligosyl trehalose synthase treX treS (requalified) — maltose alpha-D-glucosyltransferase treS malQ (requalified) — 4-alpha-glucanotransferase malQ Rv1565c (family_assigned) — acyltransferase family protein Rv1565c glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE gcvH (requalified) — glycine cleavage system protein GcvH gcvH gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA adhD (requalified) — NDMA-dependent alcohol dehydrogenase adhD adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv3725 (requalified) — oxidoreductase Rv3725 sodA (requalified) — superoxide dismutase sodA adhC (requalified) — NAD(P)-dependent alcohol dehydrogenase adhC adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd aldA (requalified) — aldehyde dehydrogenase aldA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.