MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1566c · 33 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB pirG (requalified) — exported repetitive protein pirG Rv1565c (family_assigned) — acyltransferase family protein Rv1565c Rv1158c (dark) — hypothetical protein Rv1158c Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c Rv1157c (dark) — hypothetical protein Rv1157c treX (requalified) — maltooligosyl trehalose synthase treX treY (requalified) — maltooligosyl trehalose synthase treY treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC Rv1489A (family_assigned) — hypothetical protein Rv1489A Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI pimE (requalified) — mannosyltransferase pimE eno (requalified) — phosphopyruvate hydratase eno Rv3668c (requalified) — protease Rv3668c Rv3847 (requalified) — peptidase Rv3847 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC malQ (requalified) — 4-alpha-glucanotransferase malQ glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treS (requalified) — maltose alpha-D-glucosyltransferase treS glgP (family_assigned) — glycosyltransferase family 1 protein glgP glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv2402 (requalified) — trehalase Rv2402 Rv0039c (dark) — hypothetical protein Rv0039c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.