MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1560 · 46 genes shown · anchor vapC11 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB11 (requalified) — antitoxin VapB11 vapB11 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 vapC15 (family_assigned) — PIN domain nuclease vapC15 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 ilvA (requalified) — threonine ammonia-lyase ilvA Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 vapB15 (requalified) — antitoxin VapB15 vapB15 Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv2008c (family_assigned) — hypothetical protein Rv2008c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA Rv1393c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1393c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 virS (family_assigned) — AraC family transcriptional regulator virS Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 lrpA (family_assigned) — transcriptional regulator LrpA lrpA iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1359 (family_assigned) — transcriptional regulator Rv1359 embR (requalified) — response regulator transcription factor EmbR embR Rv3840 (family_assigned) — transcriptional regulator Rv3840 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.