MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1542c · 46 genes shown · anchor lprI · open gene page → · ← back to 1 hop

Evidence: Min score 0
glbN (requalified) — group 1 truncated hemoglobin GlbN glbN lprI (family_assigned) — MliC family protein lprI Rv1544 (family_assigned) — SDR family oxidoreductase Rv1544 Rv1543 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1543 Rv1545 (dark) — hypothetical protein Rv1545 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv1546 (family_assigned) — SRPBCC family protein Rv1546 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU narK3 (requalified) — nitrate/nitrite transporter narK3 PPE22 (family_assigned) — PPE family protein PPE22 PPE22 Rv1360 (requalified) — LLM class F420-dependent oxidoreductase Rv1360 frdD (family_assigned) — fumarate reductase subunit FrdD frdD frdC (family_assigned) — fumarate reductase subunit C frdC vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv0613c (family_assigned) — SEC-C domain-containing protein Rv0613c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2 Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c darT (requalified) — toxin-antitoxin system toxin DarT darT rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c mshD (requalified) — mycothiol synthase mshD mca (requalified) — mycothiol conjugate amidase Mca mca mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB lpqE (family_assigned) — hypothetical protein lpqE Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrE (requalified) — orotate phosphoribosyltransferase pyrE Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 narG (family_assigned) — nitrate reductase subunit alpha narG narH (family_assigned) — nitrate reductase subunit beta narH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.