MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1539 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lspA (requalified) — signal peptidase II lspA Rv1540 (requalified) — RNA pseudouridine synthase Rv1540 ansA (requalified) — asparaginase ansA rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA ileS (requalified) — isoleucine--tRNA ligase ileS ftsW (family_assigned) — putative lipid II flippase FtsW ftsW lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt scpA (requalified) — segregation/condensation protein A scpA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT ychF (requalified) — redox-regulated ATPase YchF ychF Rv1225c (family_assigned) — HAD-IIA family hydrolase Rv1225c alr (requalified) — alanine racemase alr Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 rplC (requalified) — 50S ribosomal protein L3 rplC rplO (requalified) — 50S ribosomal protein L15 rplO rplM (requalified) — 50S ribosomal protein L13 rplM rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA gadB (requalified) — glutamate decarboxylase gadB infB (requalified) — translation initiation factor IF-2 infB nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA dinF (family_assigned) — MATE family efflux transporter dinF truB (requalified) — tRNA pseudouridine(55) synthase TruB truB Rv2840c (family_assigned) — hypothetical protein Rv2840c rpsK (requalified) — 30S ribosomal protein S11 rpsK proS (requalified) — proline--tRNA ligase proS gltS (requalified) — glutamate--tRNA ligase gltS leuS (requalified) — leucine--tRNA ligase leuS argS (requalified) — arginine--tRNA ligase argS metS (requalified) — methionine--tRNA ligase metS murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsQ (requalified) — cell division protein FtsQ ftsQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA yidC (requalified) — membrane protein insertase YidC yidC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.